BILS staff

The current BILS staff is listed below, with locations and expertise. For more information about individual staff members, follow the links in the table.

Please note that many of the BILS experts are active in several sub disciplines of bioinformatics.


Management

Bengt Persson (UU/KI)SciLifeLabBILS director
Mikael Borg (SU)SciLifeLabcoordination, infrastructure
Eva-Britt Berglund (LiU)Linköping Universityeconomy
Victoria Westling (LiU)Linköping Universityadministration

Genomics

Agata Smialowska (SU)ScilifelabRNAseq, ChIPseq
Dag Ahrén (LU)University of Lundlarge scale sequence analysis, NGS coordinator
Francesco Marabita (KI)Karolinska InstitutetRNA-seq, methylation
Jakob Willforss (SLU)SLU Alnarptranscriptomics
Jeanette Tångrot (UmU)Umeå Universitygenomics
Jessica Lindvall (SU)ScilifeLabhigh throughput analyses
Katarina Truvé (GU)University of Gothenburgclinical NGS data
Magnus Alm Rosenblad (GU)University of Gothenburgsequence analysis, transcriptomics, NGS coordinator
Mihaela Martis (LiU)Linköping Universitytranscriptomics, comparative genomics
Moritz Buck (UU)SciLifeLabmetagenomics, transcriptomics
Olga Dethlefsen (SU)SciLifeLabRNAseq, gene expression
Sebastian DiLorenzo (UU)SciLifeLabCancer data analysis, NGS, epigenetics
Thomas Källman (UU)SciLifeLabtranscriptomics

Genome Assembly and Annotation

Henrik Lantz (UU)SciLifeLabgenomics, transcriptomics, NGS coordinator
Jacques Dainat (UU)SciLifeLabphylogenetics, phylogenomics, comparative genomics, evolutionary sequence analysis
Lucile Soler (UU)SciLifeLabgenome annotation
Mahesh Panchal (UU)SciLifeLabassembly
Martin Norling (UU)SciLifeLabgenome assembly

Proteomics

Carina Sihlbom (GU)Gothenburg Universityproteomics
Fredrik Levander (LU)University of Lundproteomics coordinator
Jia Mi (UU)SciLifeLabproteomics
Joakim Bygdell (UmU)Umeå Universityproteomics data analysis
Jorrit Boekel (KI)SciLifeLabmass spectrometry proteomics support

Systems biology

Andrey Alexeyenko (KI)SciLifeLab Stockholmsystems biology

Metabolomics

Rui Climaco Pinto (UmU)Umeå Universitymetabolomics, chemometrics

Sequence analysis

Johan Nylander (NRM)Swedish Museum of Natural History / SciLifeLabevolutionary sequence analysis, phylogenetics, phylogenomics
Jonas Söderberg (SLU)SLU Uppsalagenome evolution, population genetics
Sara Light (SU)SciLifeLabbioinformatics, training coordinator
Yvonne Kallberg (KI)SciLifeLabprotein bioinformatics

Development

Andreas Kähäri (UU)SciLifeLabsystems development
Frédéric Haziza (UU)SciLifeLabfront-end development, cloud computing
Johan Viklund (UU)SciLifeLabsystems development
Jonas Hagberg (SU)SciLifeLab/telecommutingsystems development, development coordinator
Luciano Fernandez (GU)University of Gothenburgdatabases and data integration
Nanjiang Shu (SU)SciLifeLabsystems development
Pontus Freyhult (UU)UPPMAXdata management, software development
Samuel Lampa (SU)Scilifelabdata management, software development

Statistics

Eva Freyhult (UU)Uppsala Universitystatistics, multivariate analysis, network analysis
Marianne Sandin (UU)Uppsala Universitystatistics

Data services

Niclas Jareborg (SU)SciLifeLabdata management

The BILS staff is distributed over all major Swedish universities. They all have a national responsibility, which means that they will provide their expertise to all Swedish scientists, regardless of affiliation.

Stockholm (Stockholm University, KI, KTH)

Agata Smialowska (SU)ScilifelabRNAseq, ChIPseq
Andrey Alexeyenko (KI)SciLifeLab Stockholmsystems biology
Bengt Persson (UU/KI)SciLifeLabBILS director
Francesco Marabita (KI)Karolinska InstitutetRNA-seq, methylation
Jessica Lindvall (SU)ScilifeLabhigh throughput analyses
Johan Nylander (NRM)Swedish Museum of Natural History / SciLifeLabevolutionary sequence analysis, phylogenetics, phylogenomics
Jonas Hagberg (SU)SciLifeLab/telecommutingsystems development, development coordinator
Jorrit Boekel (KI)SciLifeLabmass spectrometry proteomics support
Mikael Borg (SU)SciLifeLabcoordination, infrastructure
Nanjiang Shu (SU)SciLifeLabsystems development
Niclas Jareborg (SU)SciLifeLabdata management
Olga Dethlefsen (SU)SciLifeLabRNAseq, gene expression
Samuel Lampa (SU)Scilifelabdata management, software development
Sara Light (SU)SciLifeLabbioinformatics, training coordinator
Yvonne Kallberg (KI)SciLifeLabprotein bioinformatics

Uppsala (Uppsala University, SLU)

Andreas Kähäri (UU)SciLifeLabsystems development
Eva Freyhult (UU)Uppsala Universitystatistics, multivariate analysis, network analysis
Frédéric Haziza (UU)SciLifeLabfront-end development, cloud computing
Henrik Lantz (UU)SciLifeLabgenomics, transcriptomics, NGS coordinator
Jacques Dainat (UU)SciLifeLabphylogenetics, phylogenomics, comparative genomics, evolutionary sequence analysis
Jia Mi (UU)SciLifeLabproteomics
Johan Viklund (UU)SciLifeLabsystems development
Jonas Söderberg (SLU)SLU Uppsalagenome evolution, population genetics
Lucile Soler (UU)SciLifeLabgenome annotation
Mahesh Panchal (UU)SciLifeLabassembly
Marianne Sandin (UU)Uppsala Universitystatistics
Martin Norling (UU)SciLifeLabgenome assembly
Moritz Buck (UU)SciLifeLabmetagenomics, transcriptomics
Pontus Freyhult (UU)UPPMAXdata management, software development
Sebastian DiLorenzo (UU)SciLifeLabCancer data analysis, NGS, epigenetics
Thomas Källman (UU)SciLifeLabtranscriptomics

Umeå (Umeå University)

Jeanette Tångrot (UmU)Umeå Universitygenomics
Joakim Bygdell (UmU)Umeå Universityproteomics data analysis
Rui Climaco Pinto (UmU)Umeå Universitymetabolomics, chemometrics

Göteborg (University of Gothenburg, Chalmers)

Carina Sihlbom (GU)Gothenburg Universityproteomics
Katarina Truvé (GU)University of Gothenburgclinical NGS data
Luciano Fernandez (GU)University of Gothenburgdatabases and data integration
Magnus Alm Rosenblad (GU)University of Gothenburgsequence analysis, transcriptomics, NGS coordinator

Lund (Lund University, SLU)

Dag Ahrén (LU)University of Lundlarge scale sequence analysis, NGS coordinator
Fredrik Levander (LU)University of Lundproteomics coordinator
Jakob Willforss (SLU)SLU Alnarptranscriptomics

Linköping (Linköping University)

Eva-Britt Berglund (LiU)Linköping Universityeconomy
Mihaela Martis (LiU)Linköping Universitytranscriptomics, comparative genomics
Victoria Westling (LiU)Linköping Universityadministration

BILS affiliates are bioinformaticians who collaborate with BILS.

Daniel Lundin (KTH)SciLifeLabmetagenomics
David Gomez-Cabrero (KI)Karolinska InstitutetRNA analysis
Henric Zazzi (KTH)PDC/SciLifeLabbioinformatics software development
Petter Ranefall (UU)Centre for Image Analysisimage analysis